Software

This is a list of our mature image analysis toolboxes. Other code in development is available on our GitHub page.

BioFormats Image Toolbox
Read microscope images in MATLAB
CyAn: Cyanobacteria image analysis toolbox
Identify and track cyanobacteria cells
Linear Assignment Tracking Toolbox
Track moving objects
ND2 Reader
Read Nikon microscope files in MATLAB

Education

Bioimaging Wiki
Online encyclopedia of biological imaging and image analysis